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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924445.1_cds_XP_016472802.1_64999
CDS Infomation

[gene=LOC107794787] [db_xref=GeneID:107794787] [protein=DEAD-box ATP-dependent RNA helicase 5-like] [partial=5'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016472802.1] [location=complement(join(24310..24405,26122..26214,26319..26483,27802..27895,28103..28171,29585..29652,29843..29899,29976..30061,31106..31184,31630..31710,31936..>32043))] [gbkey=CDS]
Sequence

ATATCAGATGTTCTCTGCGATGCTGGGAAGCCTACTGGTGTGCAGTCAGTTTGTCTATAT
GGTGGAGTCGATAAGCATCATCAAAAAGCTTCTCTTAAATCTGGTGTGGATATTGTTATT
GGAACCCCTGGTCGTTTGCAGGATATGATGGAAATGGGAGCATGCAACTTAAAAGCGGTT
TCTTTTGTGGTGCTAGATGAAGCTGATCGGATGCTCGATTTAGGTTTTGAACCTGCTGTC
CGTGCCATTTTGAGCCAAACATGCTCTGTTCGACAATCGGTTATGTTCAGTGCTACATGG
CCTCCGGCTGTTCATCAATTAGCTCAAGAATTCATGGATCCTCATCCAATCAAGGTAGTT
GTAGGTTCAGAAGATTTGGCTGCCAACCATGATGTCATGCAAATTGTCGAGGTCTTGGAA
GATCGAGCCCGTGATGAGCGTTTACAGTGCTTGCTGGAAAAATACCACAAGTTTAGAAAG
AACAGAGTATTGGTTTTTGTTTTGTACAAGAAGGAAGCATCTCGGGTTGAAATTATGCTA
CAGAAAAGGGGTTGGAAAGTTGTGTCCATTAGCGGTGACAAGCAACAACATGCTCGTACT
AAGGCGTTGTCACTCTTTAAGGATGGAAGCTGTCCTTTAATGATAGCTACTGATGTAGCT
GCTCGAGGTCTGGATATCCCAGATGTTGAAGTTGTGATAAATTATAGTTTTCCTTTGACA
ACAGAGGATTATGTTCATAGAATTGGAAGAACTGGGCGAGCTGGTAAAAAAGGTGTAGCT
CATACATTCTTCACTAAGGACAACAAGGGACTTTCTGGGGAGTTGATAAATGTTCTCAGA
GAGGCTGGACAGGTTGTGCCAGCTGCCCTTCTTAATTTTGGAACCCATGTAAAGAAAAAG
GAATCGAAGCTCTATGGTGCTCATTTTAGAGAAATAGATGCAAATGCTCCAAAGGCTACA
AAAATAAAATTTGACAATTCTGATGAGGAAGATTGA

Peptide Sequence

PEP ID

XP_016472802.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Nicotiana tabacum]
Sequence

MTNHKKTLKDSPKFESKSHKKKHKRKLEDPEPEEVTVIESKKEKKKKKKQKQNQEQEGSI
VNSENLSGSNGKVETINGSAEFSEKSSTNVVVTGKDANESKYKALAKFVDSGLPSDVLDC
CKNFEKPSPIQSHSWPFLLDGRDFIGIAKTGSGKTLAFGIPAIMHVLSKRKSKKSKNPLC
LVLSPTRELAQQISDVLCDAGKPTGVQSVCLYGGVDKHHQKASLKSGVDIVIGTPGRLQD
MMEMGACNLKAVSFVVLDEADRMLDLGFEPAVRAILSQTCSVRQSVMFSATWPPAVHQLA
QEFMDPHPIKVVVGSEDLAANHDVMQIVEVLEDRARDERLQCLLEKYHKFRKNRVLVFVL
YKKEASRVEIMLQKRGWKVVSISGDKQQHARTKALSLFKDGSCPLMIATDVAARGLDIPD
VEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTKDNKGLSGELINVLREAGQVVPA
ALLNFGTHVKKKESKLYGAHFREIDANAPKATKIKFDNSDEED

Transcript Sequence

Gene sequence data has not been registered.